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Ligand
Replacement Congeneric Series
Congeneric
arrays of chemical species can be produced by changing the ligands about
an atomic centre in a regular way. There are several approaches: ligands
can be exchanged en masse or one-at-a-time. Carbon, with its propensity
to form chains, gives rise to numerous homologous series.
Inorganic
Species
Congeneric series can occur
when a multivalent atomic centre, such as boron or aluminium, has its
ligands exchanged in a regular manner. This can occur in two ways:
Firstly, an atomic
centre can have a congeneric series of ligands changed en masse
:

The symbiosis logic of C.K.
Jørgensen suggests that Lewis acid and Lewis base atomic centres
are symbiotically hardened by hard ligands and softened by soft ligands.
The chemogenesis analysis fully supports this view, with the proviso
that quantitative structure-reactivity behaviour will only be found
when the ligands are congeneric:
Fluoride ion,
F, ligands are harder than bromide ion, Br,
ligands and therefore the Lewis acid centre of BF3
is symbiotically harder than the Lewis acid centre of BCl3
< BCl3 < BCl3.
Certainly, boron
trifluoride has a high differential affinity for hard F,
to generate the spherically symmetric [BF4]
ion.
Likewise, BBr3
has a high affinity for the softer Br Lewis base
to yield the spherically symmetric [BBr4]
species.
The ligand replacement is
also seen amongst transition metals. Copper(I) and copper(II) both form
halides, and according to web
elements, these copper halides are known:

Pearson suggested
that higher oxidation states are harder than lower oxidation states.
As predicted, copper(II) iodide the hardest cation with the softest
anion is the unknown copper halide.
Secondly, ligands
can also be changed one-at-a-time:

Notice, when the
ligands are changed one-at-a-time, the termini (ends) of the series
may end up being unrelated in a chemical reactivity sense, even though
they remain isoelectronic. For example, methane is a hydrocarbon but
carbon tetrachloride is not. In a similar manner, the ammonium ion is
a Brønsted acid but the tetraalkyl ammonium ion is not.
More that 100 ligand exchange
congeneric series are listed in The Chemical Thesaurus and these can be
searched, here.
Hydride Donor
Complex Anions
This combinatorial approach
has been exploited in the development of specialised and selective hydride
donor reagents with anions of:

The counter ion cations can
be: Li+, Na+, K+, Rb+ or Cs+.
However, lithium salts are generally preferred because they are more soluble
in diethyl ether, the usual solvent of choice for these aggressive and
reactive reagents which must be used in an anhydrous environment.
The following hydride donor
reagents are available from the
Aldrich Chemical Company:
LiAlH4
lithium aluminium hydride
Li[(RO)3AlH]
lithium tris[(3-ethyl-3-pentyl)oxo]aluminohydride
NaAlH4
sodium
aluminium hydride
Na[Et2AlH2]
sodium diethyldihydroaluminium
Organic Ligand
Exchange Congeneric Series
Tse-Loc Ho, an organic chemist,
argued that hydride ligands, H, are soft compared with
alkyl ligands, R, so the carbenium ion, H3C+,
is symbiotically softer than a trialkyl (tertiary) carbenium ion, R3C+.
Likewise, the methyl
carbanion, H3C, is symbiotically
softer than a tertiary alkyl carbanion, R3C.

This argument is quite plausible:
Methyl reactive intermediates: H3C,
H3C or H3C+,
are more polarisable and "forgiving" moieties than the trialkyl
equivalents: R3C, R3C
or R3C+ which implies that they are softer.
Tertiary alkyl bromides
will readily dissociate in polar solvents and undergo first order SN1
nucleophilic substitution, whereas methyl bromide will only undergo
concerted, second order SN2 nucleophilic substitution.
The alkyl ligands appear to have hardened the carbon centre making the
C-Br bond labile with respect to the hydrogen ligated methyl
function.
Tertiary butyl lithium,
tBuLi, is a stronger base and is less nucleophilic than methyl lithium,
MeLi.
However, symbiotic hardening
and softening effects are obscured by other factors such as the substantial
steric hindrance which occurs about bulky tertiary alkyl carbon centres
and the fact that alkyl functions strongly stabilise carbenium
ion, R3C+, centres and strongly destabilise carbanion centres,
R3C, compared with H3C+
and H3C.
It is simply not
possible to disentangle symbiosis from steric hindrance and charge stabilisation.
We just note that the H3C > RH2C
> R2HC > R3C series
whether cationic, anionic or radical show regular structural
and reactivity trends and so are congeneric.
The author has performed
numerous ab initio calculations to try and find some structural
parameter such as bond length which quantifies the assertion that methyl
anions, radicals and enium ions are softer that the alkylated analogues.
However, it
does not seem to be possible to disentangle bonding preference from
steric and charge stabilisation effects. While the author agrees with
the Ho analysis, he argues that it is not possible in principle
to provide quantitative proof.
This point is stressed
because we will be returning to the methyl, 1°, 2° & 3°
carbenium, radical and carbanion congeneric series which are so important
to organic chemistry.
There are many
examples of ligand exchange congeneric series in organic chemistry,
often based on exchanging hydrogen and alkyl ligands around carbon,
nitrogen, oxygen, silicon, phosphorus, sulfur, etc. centres. These are
all listed in The Chemical Thesaurus.
Chloroacetic Acids
The chloroacetic acids are
congeneric with electronegative chlorine atoms rendering the carboxylic
acid function a stronger Brønsted acid. pKa
data shows the species to be congeneric.

Alkanes: mp & bp
The linear alkanes and cycloalkanes
can be considered ligand replacement congeneric series. Boiling point
data show these series to be congeneric.




Notice, that with
both the linear and cyclic alkanes, the boiling points (liquid to gas
phase change) are linear with respect to carbon number, but melting
points (solid to liquid phase change) are not. The reason is due to
packing and crystallinity effects which are important in the ordered
solid phase, but which not found in the disordered liquid or gas phases.
So, ordered to disordered
phase changes likely to exhibit non-linear effects whereas disordered
to disordered phase changes are not.
Now, some readers
may be surprised that we are using melting point and boiling point examples
while discussing chemical reactions.
The reason is that
while some authors like to differentiate between physical processes,
such as phase change, and chemical reaction processes, there is no real
difference. When a water molecule moves from the liquid phase to the
gas phase it [the defined water molecule] is transferring from one chemical
environment to another, in other words it is undergoing a chemical reaction.
Throughout the Chemogenesis
web book and The Chemical Thesaurus reaction chemistry database, we
use a very broad definition of what it is that constitutes a chemical
reaction. In essence, it comes down to whether the process can be described
in the form or a chemical reaction equation with an arrow:
X +
Y
Z or
Y
Z
Using a broad definition
of what it is that constitutes a chemical reaction solves many problems,
and causes few.
  
| Quantifying
Congeneric Behaviour |
Congeneric
Array Interactions
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© Mark R. Leach 1999-2008
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