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Why Chemical Reactions Occur
Or, What's In It for the Atoms?
The chemogenesis
analysis presented in this web book is concerned with chemical reactions
and reactivity with an emphasis on the nature of mechanism, but this narrative
skirts around the fundamental question: why do chemical reactions happen?
The "why" question can be addressed at two levels, by looking
at the thermochemistry of bulk materials and by examining at what is going
on at the atomic level and the quest for spherical symmetry.
Thermochemistry
of Bulk Materials
Taking the macroscopic and
view that chemistry involves the transformation of bulk substance, we
can confidently state that a chemical reaction can feasibly occur
when the Gibbs free energy of the system decreases, ie. when DG
is negative or less than zero, DG
< 0.00.
The Gibbs
function is: DG
= DH
T DS
- D
(delta) means "change in"
- DH
is the change in enthalpy or heat equivalent
- T is the
thermodynamic temperature, the temperature in Kelvin
- DS
is the change in entropy or "dispersion of energy", where
gases are more dispersed and have greater entropy than liquids, etc.
- Reactions can
be exothermic, DH,
or endothermic, +DH
- Reactions [the
local system] can decrease in entropy, DS,
or they can increase in entropy, +DS
- For a reaction
to occur the Gibbs free energy must be negative:
G
< 0.00
- DH
, DS & DG refer to standard conditions (1.0 atm) and temperature (298K)
- DH°, DS° & DG° refer to standard conditions but non-standard temperatures
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A couple of qualifiers
There
may be a substantial activation energy that stops a thermodynamically
feasible reaction from occurring.
Many
reaction processes appear to violate the DG
< 0 rule for various reasons.
Consider
crystallisation. The process is exothermic and the crystal is
more ordered than the melt/solution and so surely, DG
is positive? However,
this analysis does not describe the thermodynamic system.
Crucially heat must be lost to the surroundings and overall DS
is positive. Such
violations to the the DG
< 0 rule are always a "local". Overall here is always
an increase in entropy when the surroundings are included as part
of the system.
That
said, it is possible to design and build real world chemical reaction
systems using glass & metal that remove heat and/or products.
The effect is to separate and isolate the local system from the
global system.
If
these issues are not pointed out, much of the following discussion
could be highly ambiguous.
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The Gibbs function, DG
= DH TDS,
tells us that the entropy term, DS,
is multiplied by the thermodynamic temperature, T, and so the energy
dispersion contribution becomes progressively more important as the temperature
is increases.
- At high temperature:
solids melt, liquids boil, bonds break and materials dissolve in solvents.
- At low temperature:
Gases condense, liquids freeze and saturated solutions yield crystals.
The Gibbs function can be used to show how water and stream interact at
50°C and 1.0 atm pressure:
The enthalpy of
formation and entropy data for liquid water and steam are both and can
be looked in tables. The data on both sides of the reaction is summed,
and the left-hand-side (reactant) data is subtracted from the right-hand-side
(product) data. For this reaction process this gives, Hreaction
= +44.0 kJ/mol and Sreaction
= +0.119 kJ/K.mol.

Choose a temperature,
say 50°C (323 Kelvin), plug the numbers into the Gibbs function
and calculate the free energy of the system:

At 50°C (323
Kelvin), the Gibbs free energy is +5.6 kJ/mol, so the reaction will
NOT proceed, in fact it will go in the reverse direction. As is well
known, at 50°C and 1.0 atm steam condenses to water.
At equilibrium DG
= 0. In this state the Gibbs relationship can be rearranged to T
= DH/DS,
an equation that tells us the temperature at which, in this case, water
will boil. Even this rather simplistic version of the Gibbs equation
predicts
370K or 97°C... really quite close to 100°C... and this is not
a full thermochemical calculation.
Consider the classic and industrially
important Haber Process
for the synthesis of ammonia.
3 H2(g)
+ N2(g)
2 NH3(g)
Interesting factoid:
1% of the world's energy supply is consumed in the manufacture of
ammonia derived fertiliser and other chemicals, Science 297(1654), Sep 2002.
The process operating conditions
are a balance between:
Overcoming the activation
energy of the reaction
Having a sufficient rate of reaction rate
Moving the equilibrium position to the production of ammonia
The cost of the industrial plant

The Gibbs function allows us
to model and understand numerous thermal reactions and processes, it tells
us a great deal about the entropy the dispersion of energy DS
and its relationship with temperature T.
The Gibbs function explains
how we can manipulate reaction systems so that they produce chemical substances
that are not in thermodynamic equilibrium with their surroundings.
Consider the production of
quick lime (calcium oxide, CaO) from limestone, one of the world's oldest
and in terms of scale one of the largest, chemical processes:
CaCO3(s)
CaO(s) + CO2(g)
The production of quicklime
illustrates the general principle of: heat, separate, cool quickly.
Heat the
reactant substance(s) so that there is a change in phase space. High
temperature means that the change occurs quickly. When calcium carbonate,
CaCO3(s), is heated to high temperature the equilibrium
position changes to carbon dioxide, CO2(g), plus
calcium oxide, CaO(s).
Separate
the phases. In the quick lime process, the hot carbon dioxide is gas
is easily removed from the local system by venting to atmosphere.
Quickly cool
the system, so trapping the various components in what is now an out-of-thermodynamic-equilibrium
state.
In the quick lime
case, the calcium oxide, CaO, is removed and placed in gas & water
proof containers. At room temperature if calcium oxide comes into contact
with carbon dioxide it will slowly react to reform calcium carbonate
and if it comes into contact with water it forms slaked lime (calcium
hydroxide), Ca(OH)2.
This type of process
relies on the general principle that the time scale for thermodynamic
equilibration is longer than the time it takes to physically separate
the phases. This is achieved through manipulation of the reaction system
using good design and operation procedures.
What's In It For
The Atoms?
However, the Gibbs function
says nothing about the nature of the DH
"bonding" term. It does not explain why the atoms choose
to react in the various ways that they do.
So, what is
in it for the atoms?
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Taking Occam's Razor to The Set of Chemical Reactions
William
of Occam (1285-1349) emphasised that it
is important to get to point, to strip away all of the
unnecessary detail and to deal with the core of the issue
at hand. Or, as William eloquently put it:
"Plurality should not be assumed without necessity."
To
find the answer to the question why do chemical reactions occur?,
it is necessary to take Occam's razor to the set of chemical reactions
and to look for the few, simple, illuminating reactions amongst
the morass of interesting but complicating detail.
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Electronegativity
In his book Modern Inorganic
Chemistry, William Jolly comments that:
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"The
most stable arrangement of [polar] covalent bonds connecting a group
of atoms is that arrangement in which the atom with the highest
electronegativity be bonded to the atom with the lowest electronegativity."
Jolly, Modern Inorganic Chemistry, McGraw-Hill (1985)
pp 61-62
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Jolly gives four examples to
illustrate this general principle. In each case there is a net increase
in electronegativity difference:
- Hydrogen iodide
reacts with chlorine to give hydrogen chloride and iodine:
2HI + Cl2 2HCl + I2
- Chlorine reacts
with iodine to give the interhalogen
compound iodine chloride, ICl:
Cl2 + I2
2ICl
- There is a ligand
exchange reaction between boron tribromide and phosphorus trichloride
to give boron trichloride and phosphorous tribromide:
BBr3 + PCl3
BCl3 + PBr3
- Titanium tetrachloride
reacts with alcohols to give the titanium tetraalkoxide and hydrogen
chloride:
TiCl4 + 4
R-OH
Ti(OR)4 + 4HCl

Revised
Pauling electronegativity data is used. Download
the Excel Spreadsheet here.
Disproportionation of Difluoromethane
This author's choice for the
reaction that most clearly illuminates what's in it for the atom
is the disproportionation of difluoromethane, CH2F2,
to methane, CH4, and tetrafluoromethane, CF4:
This reaction can be considered
can be considered thermochemically:

Download the Excel
spreadsheet here.
The reaction system is particularly
simple because:
- All species are molecular
and in the gas phase.
- The reaction proceeds under
thermal conditions and equilibrium is reached.
- The reaction is clearly
exothermic, DHrxn =
-102 kJ/mol.
G
is negative at all temperatures
- To good approximation the DS enthalpy term is
negligible and can be ignored in most disproportionation reactions.
Another example: On
heating formaldehyde (methanal) disproportionates to methane and carbon
dioxide:

For organic chemists,
this is the 'parent example' of the Cannizzaro
reaction, a reaction that involves the disproportionation of an
aldehyde into a primary alcohol and a carboxylic acid.
A third example, but this time
a ligand exchange rather than a disproportionation reaction. When
heated together, trifluoroiodomethane reacts with fluoromethane to give
tetrafluoromethane and methyl iodide.

In 1967 Ralph Pearson cited these
three reactions in support of his (then new) HSAB principle, saying:
"The symbiotic principle states that there is an extra stabilisation if several soft bases (ligands) or several hard bases cluster about a single acidic atom." Pearson & Songstad, JACS, 89, 1827 (1967).
[ Read more about Pearson's HSAB principle look elsewhere in this web book.]
In this authors opinion,
these reactions show no such thing. What they do show is general and far
more interesting: if an atomic centre has multiple ligands/bonding partners,
then the atomic centre prefers to have similar ligands rather than mixed
bonding partners.
Indeed, it appears to be general
that:
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Atomic centres behave so as to maximise their spherical symmetry.
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Spherical symmetry can be defined
(from Symmetry:
A Unifying Concept by István & Magdolna Hargittai):
"Everything is the
same in all directions, as if on the surface of a sphere."
The pollen of hollyhock
exhibits spherical symmetry:

Maximising Spherical Symmetry: Molecular Orbitals
Consider again the species
involved in the 2 CH2F2
CH4 +
CF4 disproportionation reaction:
Methane, CH4,
and tetrafluoromethane, CF4, are perfect
tetrahedral octapoles: they have zero dipole moment and belong to Td
the symmetry
point group.
Difluoromethane,
CH2F2, has a dipole moment
of 2.29 debyes (calculated) and the molecule belongs to the C2v symmetry
point group.
The HOMO and LUMO
frontier molecular orbitals are clearly more spherically symmetric in
CH4 and CF4 compared with
CH2F2:

Compare the HOMO
of CH2F2 with the HOMOs
of CH4 and CF4. The CH4
and CH4 HOMOs are clearly have more spherical
symmetry than the CH2F2
HOMO. It is the same with the LUMOs. Diagrams obtained using Spartan.
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The observation that
atoms strive to achieve spherical symmetry should not be unexpected
because it can be seen with the simplest chemical systems, including
isolated atoms.
Indeed, an atom's
quest for spherical symmetry is a dominant theme in chemistry.
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Maximising Spherical
Symmetry: Atomic Orbitals
Consider the electronic structure
of atoms. Electrons add to atoms according to a few simple
rules:
- The Pauli exclusion
principle states that an orbital can contain a maximum of two electrons
that must be of opposite spin.
- The Aufbau or build-up
principle states that electrons enter and fill lower energy orbitals
before higher energy orbitals.
- Hund's rule states
that when there there are degenerate (equal energy) orbitals available,
electrons will enter the orbitals one at a time and only when all the
orbitals are half filled will pairing-up occur.
- These rules act
so as to maximise the spherical symmetry of the atom. The spherical
s-orbitals fill before the dumbell-like p-orbitals, and the dumbell-like
p-orbitals fill with electrons one-at-a-time before pairing up:

Nitrogen as 1s2
2s2 2px1 2py1 2pz1 is
more spherically symmetric than 1s2 2s2 2px2
2py1 2pz0
Copper as [Ar]
3d10 4s1 is more spherically symmetric than
[Ar] 3d9 4s2
Maximising Spherical Symmetry: Valence Shell Electron Pair Repulsion
Consider the valence shell
electron pair repulsion, VSEPR method.

In this technique, bonding and non-bonding ("lone-pairs") of electrons are arranged about the atomic centre so as to maximise the spherical symmetry. Interestingly, nature adopts the same strategy, the maximisation of spherically. Thus, the VSEPR method can be used to predict molecular and ionic shape rather well.
Read more about VSEPR elsewhere in this web book.
Maximising Spherical Symmetry: Disproportionation
Atom centres with multiple ligands adopt the most spherically symmetric conformation, as predicted by VSEPR.
Likewise,
atomic centres with mixed ligands undergo exchange reactions to
maximise spherical symmetry.
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Thus, on heating difluoromethane,
CH2F2, disproportionates to
methane, CH4, and tetrafluoromethane, CF4
because methane, CH4, and tetrafluoromethane, CF4,
are more spherically symmetric than difluoromethane, CH2F2.

The DH
enthalpy term of the Gibbs function, or what's in it for the atom,
concerns the maximisation of atomic spherical symmetry.
Maximising Spherical Symmetry: Co-operation,
Winners & Losers
Atoms in molecules and materials
co-operate and compete so as to maximise the net atomic spherical
symmetry. In a reaction there may be winners as losers, although the winners
will always win more than the losers lose.
An example:
Aluminium chloride, AlCl3,
reacts with alkyl chlorides, R-Cl, to give tetrachloroaluminate ion,
[AlCl4], and a carbenium ion
(carbocation), [R-CH2]+. The reaction
is used in the first step of the Friedel-Crafts
alkylation reaction.

In this reaction the trigonal
planar aluminium chloride Lewis acid, AlCl3, gains more spherical symmetry
on going to the tetrahedral tetrachloroaluminate ion, [AlCl4],
than the alkyl chloride, R-CH2Cl, looses on forming
a carbenium ion, [R-CH2]+.
Pauling's Five Rules for Crystal Structure
The crystal structure of an
ionic compound can be predicted using a set of empirical rules that act
to maximise spherical symmetry about as many centres as possible:
- The First Rule:
Around every cation, a coordination polyhedron of anions forms, in which
the cation-anion distance is determined by the radius sums and the coordination
number is determined by the radius ratio.
- The Number of Polyhedra
with a Common Corner - The Electrostatic Valence Rule: An ionic structure
will be stable to the extent that the sum of the strengths of the electrostatic
bonds that reach an anion equals the charge on that anion.
- The Sharing of
Polyhedra Edges, Faces & Corners, particularly faces by two anion
polyhedra, decreases the stability of a crystal.
- An extension of
the third rule: In a crystal which contains different cations, those
with high charge and low coordination numbers tend not to share elements
of their coordination polyhedra.
- The Rule of Parsimony
The number of essentially different kinds of constituents in a crystal
tends to be small.
Crystal structures
are usually named after a definitive crystal structure, such as: zinc
sulfide (structure), sodium chloride, cesium chloride, calcium fluoride
(fluorite), rutile, diamond, etc.
Read more in the Wikipedia
and ScienceWorld.
Mechanism and The Kinetic Domain
Consider again the
2 CH2F2 CH4
+ CF4 disproportionation reaction, and
ask the question: Are
there any possible competing reactions?
There is one, the 'coking'
reaction:
CH2F2
C + 2HF
the production of hydrogen
fluoride and carbon.
Thermochemistry calculations
show this pathway is energetically preferred over disproportionation:

At 300° DG
for disproportionation is -76 kJ/mol and for carbon + HF formation is
-150 kJ/mol.
Download the spreadsheet.
Yet the 2 CH2F2
CH4 +
CF4 disproportionation reaction occurs.
So, the question is:
Why does CH2F2
disproportionate to CH4
+ CF4 and not to C +
2HF?
The answer is subtle.
- When there are
two or more possible reactions, each reaction will proceed by an associated
reaction mechanism and each mechanism will have an associated activation
energy, Eactiv., and enthalpy of reaction,
DHrxn.
- Under local
conditions, the reaction will always proceed via the mechanistic
pathway that has the lowest activation energy.
- The effect is to
produce the locally thermodynamically more stable products
rather than globally most thermodynamically stable products.

The Gibbs equation can predict
whether a particular reaction is thermodynamically feasible and it can
be used to compare reactions, but it tells us nothing about the
set of possible reactions or the activation energies of those reactions.
The topology of this complex
space must be determined by experiment.
A physical geography example illustrates this important point:
- Rain falls on land and the water flows in rivers to the sea. Gravity acts upon the liquid water which flows down hill and the thermodynamic outcome is assured.
- However, rain water also collects in ponds, marshes and lakes in apparent defiance of the overall thermodynamics.
- These are local minima.
- To understand the distribution of rivers, ponds, marshes, glaciers, creeks, lakes, etc., it is necessary to know the topology of the region, and understand how this is influencing the local flow of water, the hydrodynamics.

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And so it is with chemistry:
Chemical
reactivity is dominated by the mechanistic topology of the local
reaction chemistry space.
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Thus, the Chemogenesis web
book is primarily concerned with the nature of mechanism and complexity.

| Classification of Matter |
Chemogenesis in 500 Seconds
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© Mark R. Leach 1999-2008
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